Appendix G — Environment and R Packages

Published

July 23, 2026

G.1 Environment

This book was built using

  • R version 4.6.1 (2026-06-24).
  • RStudio version 2026.07.1 Build 147
  • Quarto version: 1.9.37
  • OS: Darwin, 25.5.0, Darwin Kernel Version 25.5.0: Tue Jun 9 22:27:52 PDT 2026; root:xnu-12377.121.10~1/RELEASE_ARM64_T8112, AU-macbook.local, arm64, root, rressler, rressler

G.2 R Packages

This book uses the following non-Base R packages as of 2026-07-23.

               Package    Version
1                abind      1.4-8
2                  air      0.2.3
3                arrow     25.0.0
4                aRxiv       0.20
5              askpass      1.2.1
6           assertthat      0.2.1
7              attempt      0.3.1
8            available      1.1.0
9            backports      1.5.1
10           base64enc      0.1-6
11                  BH   1.90.0-1
12              binman      0.1.3
13                 bit      4.6.0
14               bit64      4.8.2
15              bitops      1.0-9
16                blob      1.3.0
17                brew     1.0-10
18                brio      1.1.5
19               broom     1.0.13
20               bslib     0.11.0
21              cachem      1.1.0
22               callr      3.8.0
23             caTools     1.18.4
24          cellranger      1.1.0
25            classInt     0.4-11
26                 cli      3.6.6
27               clipr      0.8.1
28          clisymbols      1.2.0
29          colorspace      2.1-3
30            cols4all       0.10
31          commonmark      2.0.0
32              config      0.3.2
33          conflicted      1.2.0
34               cpp11      0.5.5
35              crayon      1.5.3
36         credentials      2.0.3
37           crosstalk      1.2.2
38                curl      7.1.0
39          data.table     1.18.4
40                 DBI      1.3.0
41              dbplyr      2.6.0
42                desc      1.4.3
43            devtools      2.5.2
44             diffobj      0.3.8
45              digest     0.6.39
46             downlit      0.4.5
47               dplyr      1.2.1
48              dtplyr      1.3.3
49              duckdb    1.5.4.3
50               e1071     1.7-17
51            ellipsis      0.3.3
52            errorist      0.1.3
53            evaluate      1.0.5
54               fansi      1.0.7
55              farver      2.1.2
56             fastmap      1.2.0
57           fastmatch      1.1-8
58            filelock      1.0.3
59         fontawesome      0.5.3
60             forcats      1.0.1
61               fresh      0.2.2
62                  fs      2.1.0
63           gapminder      1.0.1
64              gargle      1.6.1
65            generics      0.1.4
66           geojsonsf      2.0.5
67          geometries      0.2.5
68                geos      0.2.5
69                gert      2.4.0
70           gganimate     1.0.11
71             ggforce      0.5.0
72             ggplot2      4.0.3
73              ggraph      2.2.2
74             ggrepel      0.9.8
75           ggspatial     1.1.10
76            ggthemes      5.2.0
77                  gh      1.6.1
78              gifski   1.32.0-2
79            gitcreds      0.1.2
80                glue      1.8.1
81               golem      1.0.1
82         googledrive      2.1.2
83       googlesheets4      1.1.2
84        graphlayouts      1.2.5
85           gridExtra      2.3.1
86              gtable      0.3.6
87          gutenbergr      0.5.2
88               haven      2.5.5
89                here      1.0.2
90              hexbin     1.28.5
91               highr       0.12
92                 hms      1.1.4
93           htmltools      0.5.9
94         htmlwidgets 1.6.4.9000
95              httpuv     1.6.17
96                httr      1.4.8
97               httr2      1.3.0
98                 ids      1.0.1
99              igraph      2.3.3
100                ini      0.3.1
101            isoband      0.3.0
102           ISOcodes 2026.03.28
103        janeaustenr      1.0.0
104            janitor      2.2.1
105               jpeg     0.1-11
106          jquerylib      0.1.4
107            jsonify      1.2.3
108           jsonlite      2.0.0
109            keyring      1.4.1
110              knitr       1.51
111           labeling      0.4.3
112              later      1.4.8
113           lazyeval      0.2.3
114             leafem      0.2.5
115             leafgl      0.2.4
116         leaflegend      1.2.8
117            leaflet      2.2.3
118  leaflet.providers      3.0.0
119            leafpop      0.1.0
120           leafsync      0.1.0
121            libgeos   3.11.1-3
122          lifecycle      1.0.5
123              lintr      3.4.0
124             logger      0.4.2
125            lpSolve     5.6.23
126          lubridate      1.9.5
127             lwgeom     0.2-17
128             magick      2.9.1
129           magrittr      2.0.5
130               maps      3.4.3
131           maptiles     0.12.0
132            mapview     2.11.4
133            memoise      2.0.1
134               mime       0.13
135             miniUI      0.1.2
136             modelr     0.1.11
137         modeltools     0.2-24
138     NasdaqDataLink      1.0.0
139                NLP      0.3-3
140       nycflights13      1.0.2
141            openssl      2.4.2
142               otel      0.2.0
143                pak     0.11.1
144     palmerpenguins      0.1.1
145          patchwork      1.3.2
146             pillar     1.11.1
147           pkgbuild      1.4.8
148          pkgconfig      2.0.3
149            pkgdown      2.2.1
150            pkgload      1.5.3
151             plotly     4.12.1
152               plyr      1.8.9
153                png      0.1-9
154           polyclip     1.10-7
155             praise      1.0.0
156        prettyunits      1.2.0
157           processx      3.9.0
158            profvis      0.4.0
159           progress      1.2.3
160           promises      1.5.0
161              proxy     0.4-29
162                 ps      1.9.3
163              purrr      1.2.2
164           quanteda        4.4
165             quarto      1.5.1
166            R.cache     0.17.0
167        R.methodsS3      1.8.2
168               R.oo     1.27.1
169            R.utils     2.13.0
170                 R6      2.6.1
171               ragg      1.5.2
172         rapidjsonr      1.2.1
173           rappdirs      0.3.4
174             raster     3.6-32
175          rcmdcheck      1.4.0
176       RColorBrewer      1.1-3
177               Rcpp      1.1.2
178      RcppArmadillo   15.4.0-1
179           RcppTOML      0.2.3
180        readMDTable      0.4.0
181              readr      2.2.0
182             readxl      1.5.0
183            rematch      2.0.0
184           rematch2      2.1.2
185            remotes      2.5.0
186               renv      1.2.3
187               repr      1.1.7
188             reprex      2.1.1
189        repurrrsive      1.1.0
190           reshape2      1.4.5
191             result      0.1.0
192         reticulate     1.46.0
193                rex      1.2.2
194               rhub      2.0.1
195              rJava     1.0-18
196              rjson     0.2.23
197              rlang      1.3.0
198         rmapshaper      0.6.1
199          rmarkdown       2.31
200      rnaturalearth      1.2.0
201  rnaturalearthdata      1.0.0
202 rnaturalearthhires 1.0.0.9000
203               rosm      0.3.1
204           roxygen2      8.0.0
205        rpivotTable      0.3.0
206          rprojroot      2.1.1
207          RSelenium     1.7.10
208           RSocrata   1.7.16-1
209         rstudioapi     0.19.0
210          rversions      3.0.0
211              rvest      1.0.5
212                 s2     1.1.11
213                 S7      0.2.2
214               sass     0.4.10
215          satellite      1.0.6
216             scales      1.4.0
217           searcher      0.0.7
218            selectr      0.6-0
219             semver      0.2.1
220              servr       0.33
221        sessioninfo      1.2.4
222                 sf      1.1-2
223          sfheaders      0.4.5
224              shiny     1.14.0
225        shinythemes      1.2.0
226              skimr      2.2.2
227               slam     0.1-56
228          snakecase     0.11.1
229          SnowballC      0.7.1
230        sourcetools    0.1.7-2
231                 sp      2.2-3
232          spacesXYZ      1.6-0
233             spacyr      1.3.0
234           spotifyr      2.2.5
235              stars      0.7-3
236          stopwords        2.3
237         stringdist     0.9.17
238            stringi      1.8.7
239            stringr      1.6.0
240             styler     1.11.0
241            svglite      2.2.2
242                sys      3.4.3
243        systemfonts      1.3.2
244          tabulapdf    1.0.5-5
245              terra     1.9-34
246           testthat      3.3.2
247           textdata      0.4.5
248        textshaping      1.0.5
249           thematic      0.1.8
250             tibble      3.3.1
251         tidycensus      1.8.1
252          tidygraph      1.3.1
253              tidyr      1.3.2
254         tidyselect      1.2.1
255           tidytext      0.4.3
256          tidyverse      2.0.0
257             tigris      2.2.1
258         timechange      0.4.0
259            tinytex       0.60
260                 tm     0.7-18
261               tmap      4.4-1
262          tmaptools        3.3
263         tokenizers      0.3.0
264        topicmodels     0.2-17
265         transformr      0.1.5
266          triebeard      0.4.1
267             tweenr      2.0.3
268               tzdb      0.5.0
269              units      1.0-1
270         urlchecker      2.0.0
271           urltools    1.7.3.1
272            usethis      3.2.1
273              usmap      1.0.0
274          usmapdata      1.0.0
275               utf8      1.2.6
276               uuid      1.2-2
277                 V8      8.2.0
278              vctrs      0.7.3
279            viridis      0.6.5
280        viridisLite      0.4.3
281              vroom      1.7.1
282              waldo      0.6.2
283              wdman      0.2.6
284            whisker      0.4.1
285             whoami      1.3.0
286              withr      3.0.3
287                 wk      0.9.5
288          wordcloud        2.6
289               xfun       0.60
290                XML  3.99-0.23
291               xml2      1.6.0
292       xmlparsedata      1.0.5
293              xopen      1.0.1
294             xtable      1.8-8
295                xts     0.14.2
296               yaml     2.3.12
297              yesno      0.1.3
298            yyjsonr     0.1.22
299                zip      3.0.1
300                zoo     1.8-15

G.3 Python Environment

python:         /Users/rressler/Courses/DATA-413-613/lectures_book/.venv/bin/python
libpython:      /Users/rressler/.local/share/uv/python/cpython-3.13.13-macos-aarch64-none/lib/libpython3.13.dylib
pythonhome:     /Users/rressler/Courses/DATA-413-613/lectures_book/.venv:/Users/rressler/Courses/DATA-413-613/lectures_book/.venv
virtualenv:     /Users/rressler/Courses/DATA-413-613/lectures_book/.venv/bin/activate_this.py
version:        3.13.13 (main, Apr  7 2026, 20:37:34) [Clang 22.1.1 ]
numpy:          /Users/rressler/Courses/DATA-413-613/lectures_book/.venv/lib/python3.13/site-packages/numpy
numpy_version:  2.4.4

NOTE: Python version was forced by VIRTUAL_ENV