Appendix F — Environment and R Packages

Published

March 15, 2026

F.1 Environment

This book was built using

  • R version 4.5.2 (2025-10-31).
  • RStudio version 2026.01.1 Build 403
  • Quarto version: 1.7.30
  • OS: Darwin, 25.3.0, Darwin Kernel Version 25.3.0: Wed Jan 28 20:56:34 PST 2026; root:xnu-12377.91.3~2/RELEASE_ARM64_T8112, AU-macbook.local, arm64, root, rressler, rressler

F.2 R Packages

This book uses the following non-Base R packages as of 2026-03-15.

               Package    Version Built
1                abind      1.4-8 4.5.0
2                aRxiv       0.18 4.5.2
3          AsioHeaders   1.30.2-1 4.5.0
4              askpass      1.2.1 4.5.0
5           assertthat      0.2.1 4.5.0
6              attempt      0.3.1 4.5.0
7            available      1.1.0 4.5.0
8            backports      1.5.0 4.5.0
9            base64enc      0.1-6 4.5.2
10                  BH   1.90.0-1 4.5.2
11              binman      0.1.3 4.5.0
12                 bit      4.6.0 4.5.0
13               bit64    4.6.0-1 4.5.0
14              bitops      1.0-9 4.5.0
15                blob      1.3.0 4.5.2
16                brew     1.0-10 4.5.0
17                brio      1.1.5 4.5.0
18               broom     1.0.12 4.5.2
19             bsicons      0.1.2 4.5.0
20               bslib     0.10.0 4.5.2
21              cachem      1.1.0 4.5.0
22               callr      3.7.6 4.5.0
23             caTools     1.18.3 4.5.0
24          cellranger      1.1.0 4.5.0
25            chromote      0.5.1 4.5.0
26            classInt     0.4-11 4.5.0
27                 cli      3.6.5 4.5.0
28               clipr      0.8.0 4.5.0
29          clisymbols      1.2.0 4.5.0
30          colorspace      2.1-2 4.5.0
31            cols4all       0.10 4.5.0
32          commonmark      2.0.0 4.5.0
33              config      0.3.2 4.5.0
34          conflicted      1.2.0 4.5.0
35               cpp11      0.5.3 4.5.0
36              crayon      1.5.3 4.5.0
37         credentials      2.0.3 4.5.0
38           crosstalk      1.2.2 4.5.0
39                curl      7.0.0 4.5.0
40          data.table   1.18.2.1 4.5.2
41                 DBI      1.3.0 4.5.2
42              dbplyr      2.5.2 4.5.2
43                desc      1.4.3 4.5.0
44            devtools      2.4.6 4.5.0
45             diffobj      0.3.6 4.5.0
46              digest     0.6.39 4.5.2
47             downlit      0.4.5 4.5.2
48               dplyr      1.2.0 4.5.2
49                  DT     0.34.0 4.5.0
50              dtplyr      1.3.3 4.5.2
51              duckdb      1.4.4 4.5.2
52               e1071     1.7-17 4.5.2
53            ellipsis      0.3.2 4.5.0
54            errorist      0.1.3 4.5.0
55            evaluate      1.0.5 4.5.0
56               fansi      1.0.7 4.5.2
57              farver      2.1.2 4.5.0
58             fastmap      1.2.0 4.5.0
59           fastmatch      1.1-8 4.5.2
60            filelock      1.0.3 4.5.0
61         fontawesome      0.5.3 4.5.0
62             forcats      1.0.1 4.5.0
63               fresh      0.2.2 4.5.0
64                  fs      1.6.6 4.5.0
65              future     1.69.0 4.5.2
66        future.apply     1.20.2 4.5.2
67           gapminder      1.0.1 4.5.0
68              gargle      1.6.1 4.5.2
69            generics      0.1.4 4.5.0
70           geojsonsf      2.0.5 4.5.2
71          geometries      0.2.5 4.5.2
72                geos      0.2.5 4.5.2
73                gert      2.3.1 4.5.2
74           gganimate     1.0.11 4.5.0
75             ggforce      0.5.0 4.5.0
76             ggplot2      4.0.2 4.5.2
77              ggraph      2.2.2 4.5.0
78             ggrepel      0.9.7 4.5.2
79           ggspatial     1.1.10 4.5.0
80            ggthemes      5.2.0 4.5.2
81                  gh      1.5.0 4.5.0
82              gifski   1.32.0-2 4.5.0
83            gitcreds      0.1.2 4.5.0
84             globals     0.19.0 4.5.2
85                glue      1.8.0 4.5.0
86               golem      0.5.1 4.5.0
87         googledrive      2.1.2 4.5.0
88       googlesheets4      1.1.2 4.5.0
89        graphlayouts      1.2.3 4.5.2
90           gridExtra        2.3 4.5.0
91              gtable      0.3.6 4.5.0
92          gutenbergr      0.4.1 4.5.2
93               haven      2.5.5 4.5.0
94                here      1.0.2 4.5.0
95              hexbin     1.28.5 4.5.0
96               highr       0.11 4.5.0
97                 hms      1.1.4 4.5.0
98           htmltools      0.5.9 4.5.2
99         htmlwidgets      1.6.4 4.5.0
100             httpuv     1.6.16 4.5.0
101               httr      1.4.8 4.5.2
102              httr2      1.2.2 4.5.2
103                ids      1.0.1 4.5.0
104             igraph      2.2.2 4.5.2
105                ini      0.3.1 4.5.0
106            isoband      0.3.0 4.5.2
107           ISOcodes 2025.05.18 4.5.0
108        janeaustenr      1.0.0 4.5.0
109            janitor      2.2.1 4.5.0
110               jose      1.2.1 4.5.0
111               jpeg     0.1-11 4.5.0
112          jquerylib      0.1.4 4.5.0
113            jsonify      1.2.3 4.5.2
114           jsonlite      2.0.0 4.5.0
115            keyring      1.4.1 4.5.0
116              knitr       1.51 4.5.2
117           labeling      0.4.3 4.5.0
118              later      1.4.7 4.5.2
119           lazyeval      0.2.2 4.5.0
120             leafem      0.2.5 4.5.0
121             leafgl      0.2.2 4.5.0
122         leaflegend      1.2.1 4.5.0
123            leaflet      2.2.3 4.5.0
124  leaflet.providers      2.0.0 4.5.0
125            leafpop      0.1.0 4.5.0
126           leafsync      0.1.0 4.5.0
127            libgeos   3.11.1-3 4.5.0
128          lifecycle      1.0.5 4.5.2
129              lintr    3.3.0-1 4.5.2
130            listenv     0.10.0 4.5.0
131             logger      0.4.1 4.5.0
132            lpSolve     5.6.23 4.5.0
133          lubridate      1.9.5 4.5.2
134             lwgeom     0.2-15 4.5.2
135             magick      2.9.1 4.5.2
136           magrittr      2.0.4 4.5.0
137               maps      3.4.3 4.5.0
138           maptiles     0.11.0 4.5.2
139            mapview     2.11.4 4.5.0
140            memoise      2.0.1 4.5.0
141               mime       0.13 4.5.0
142             miniUI      0.1.2 4.5.0
143             modelr     0.1.11 4.5.0
144         modeltools     0.2-24 4.5.0
145     NasdaqDataLink      1.0.0 4.5.0
146            netstat      0.1.2 4.5.0
147                NLP      0.3-2 4.5.0
148       nycflights13      1.0.2 4.5.0
149               odbc    1.6.4.1 4.5.2
150            openssl      2.3.5 4.5.2
151               otel      0.2.0 4.5.0
152            packrat      0.9.3 4.5.0
153     palmerpenguins      0.1.1 4.5.0
154         parallelly     1.46.1 4.5.2
155          patchwork      1.3.2 4.5.0
156                PDE     1.4.10 4.5.0
157             pillar     1.11.1 4.5.0
158           pkgbuild      1.4.8 4.5.0
159          pkgconfig      2.0.3 4.5.0
160            pkgdown      2.2.0 4.5.0
161            pkgload      1.5.0 4.5.2
162                PKI     0.1-15 4.5.0
163             plotly     4.12.0 4.5.2
164               plyr      1.8.9 4.5.0
165                png      0.1-8 4.5.0
166             polite      0.1.3 4.5.0
167           polyclip     1.10-7 4.5.0
168             praise      1.0.0 4.5.0
169        prettyunits      1.2.0 4.5.0
170           processx      3.8.6 4.5.0
171            profvis      0.4.0 4.5.0
172           progress      1.2.3 4.5.0
173          progressr     0.18.0 4.5.0
174           promises      1.5.0 4.5.0
175              proxy     0.4-29 4.5.2
176                 ps      1.9.1 4.5.0
177              purrr      1.2.1 4.5.2
178             Quandl     2.11.0 4.5.0
179           quanteda      4.3.1 4.5.0
180             quarto      1.5.1 4.5.0
181            R.cache     0.17.0 4.5.0
182        R.methodsS3      1.8.2 4.5.0
183               R.oo     1.27.1 4.5.0
184            R.utils     2.13.0 4.5.0
185                 R6      2.6.1 4.5.0
186               ragg      1.5.0 4.5.0
187         rapidjsonr      1.2.1 4.5.2
188           rappdirs      0.3.4 4.5.0
189             raster     3.6-32 4.5.0
190         ratelimitr      0.4.2 4.5.0
191          rcmdcheck      1.4.0 4.5.0
192       RColorBrewer      1.1-3 4.5.0
193               Rcpp      1.1.1 4.5.2
194      RcppArmadillo   15.2.3-1 4.5.2
195           RcppTOML      0.2.3 4.5.0
196        readMDTable      0.3.2 4.5.0
197              readr      2.2.0 4.5.2
198             readxl      1.4.5 4.5.0
199            rematch      2.0.0 4.5.0
200           rematch2      2.1.2 4.5.0
201            remotes      2.5.0 4.5.0
202               renv      1.1.7 4.5.2
203               repr      1.1.7 4.5.0
204             reprex      2.1.1 4.5.0
205        repurrrsive      1.1.0 4.5.0
206           reshape2      1.4.5 4.5.0
207         reticulate     1.45.0 4.5.2
208                rex      1.2.1 4.5.0
209               rhub      2.0.1 4.5.0
210              rJava     1.0-14 4.5.0
211              rlang      1.1.7 4.5.2
212         rmapshaper      0.6.0 4.5.2
213          rmarkdown       2.30 4.5.0
214      rnaturalearth      1.2.0 4.5.2
215  rnaturalearthdata      1.0.0 4.5.0
216 rnaturalearthhires 1.0.0.9000 4.5.1
217          robotstxt     0.7.15 4.5.0
218               rosm      0.3.1 4.5.2
219           roxygen2      7.3.3 4.5.0
220        rpivotTable      0.3.0 4.5.0
221        rplaywright     1.43.6 4.5.1
222          rprojroot      2.1.1 4.5.0
223          rsconnect      1.7.0 4.5.2
224          RSelenium     1.7.10 4.5.2
225         rstudioapi     0.18.0 4.5.0
226          rversions      3.0.0 4.5.0
227              rvest      1.0.5 4.5.0
228                 s2      1.1.9 4.5.0
229                 S7      0.2.1 4.5.2
230               sass     0.4.10 4.5.0
231          satellite      1.0.6 4.5.0
232             scales      1.4.0 4.5.0
233           searcher      0.0.7 4.5.0
234            selectr      0.5-1 4.5.2
235             semver      0.2.1 4.5.2
236              servr       0.32 4.5.0
237        sessioninfo      1.2.3 4.5.0
238                 sf      1.1-0 4.5.2
239          sfheaders      0.4.5 4.5.2
240              shiny     1.13.0 4.5.2
241        shinythemes      1.2.0 4.5.0
242           showtext      0.9-7 4.5.0
243         showtextdb        3.0 4.5.0
244              skimr      2.2.2 4.5.2
245               slam     0.1-55 4.5.0
246         slippymath      0.3.1 4.5.0
247          snakecase     0.11.1 4.5.0
248          SnowballC      0.7.1 4.5.0
249      snowflakeauth      0.2.2 4.5.2
250        sourcetools    0.1.7-1 4.5.0
251                 sp      2.2-1 4.5.2
252          spacesXYZ      1.6-0 4.5.0
253          spiderbar      0.2.5 4.5.0
254           spotifyr      2.2.5 4.5.0
255              stars      0.7-1 4.5.2
256         starwarsdb      0.1.3 4.5.0
257          stopwords        2.3 4.5.0
258         stringdist     0.9.17 4.5.2
259            stringi      1.8.7 4.5.0
260            stringr      1.6.0 4.5.0
261             styler     1.11.0 4.5.0
262            svglite      2.2.2 4.5.0
263                sys      3.4.3 4.5.0
264           sysfonts      0.8.9 4.5.0
265        systemfonts      1.3.1 4.5.0
266          tabulapdf    1.0.5-5 4.5.0
267             tcltk2      1.6.1 4.5.0
268              terra     1.8-93 4.5.2
269           testthat      3.3.2 4.5.2
270           textdata      0.4.5 4.5.0
271        textshaping      1.0.4 4.5.0
272           thematic      0.1.8 4.5.0
273             tibble      3.3.1 4.5.2
274         tidycensus      1.7.5 4.5.2
275          tidygraph      1.3.1 4.5.0
276              tidyr      1.3.2 4.5.2
277         tidyselect      1.2.1 4.5.0
278           tidytext      0.4.3 4.5.0
279          tidyverse      2.0.0 4.5.0
280             tigris      2.2.1 4.5.0
281         timechange      0.4.0 4.5.2
282            tinytex       0.58 4.5.2
283                 tm     0.7-18 4.5.2
284               tmap        4.2 4.5.0
285          tmaptools        3.3 4.5.0
286         tokenizers      0.3.0 4.5.0
287        topicmodels     0.2-17 4.5.0
288         transformr      0.1.5 4.5.0
289          triebeard      0.4.1 4.5.0
290             tweenr      2.0.3 4.5.0
291               tzdb      0.5.0 4.5.0
292              units      1.0-0 4.5.0
293         urlchecker      1.0.1 4.5.0
294           urltools    1.7.3.1 4.5.0
295            usethis      3.2.1 4.5.0
296              usmap      1.0.0 4.5.0
297          usmapdata      1.0.0 4.5.0
298               utf8      1.2.6 4.5.0
299               uuid      1.2-2 4.5.2
300                 V8      8.0.1 4.5.0
301              vctrs      0.7.1 4.5.2
302            viridis      0.6.5 4.5.0
303        viridisLite      0.4.3 4.5.2
304              vroom      1.7.0 4.5.2
305              waldo      0.6.2 4.5.0
306              wdman      0.2.6 4.5.0
307          websocket      1.4.4 4.5.0
308            whisker      0.4.1 4.5.0
309             whoami      1.3.0 4.5.0
310              withr      3.0.2 4.5.0
311                 wk      0.9.5 4.5.2
312          wordcloud        2.6 4.5.0
313               xfun       0.56 4.5.2
314                XML  3.99-0.22 4.5.2
315               xml2      1.5.2 4.5.2
316       xmlparsedata      1.0.5 4.5.0
317              xopen      1.0.1 4.5.0
318             xtable      1.8-8 4.5.2
319                xts     0.14.2 4.5.2
320               yaml     2.3.12 4.5.2
321              yesno      0.1.3 4.5.0
322                zip      2.3.3 4.5.0
323                zoo     1.8-15 4.5.2

F.3 Python Environment

python:         /Users/rressler/Courses/DATA-413-613/lectures_book/.venv/bin/python
libpython:      /Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/config-3.14-darwin/libpython3.14.dylib
pythonhome:     /Users/rressler/Courses/DATA-413-613/lectures_book/.venv:/Users/rressler/Courses/DATA-413-613/lectures_book/.venv
version:        3.14.0 (v3.14.0:ebf955df7a8, Oct  7 2025, 08:20:14) [Clang 16.0.0 (clang-1600.0.26.6)]
numpy:          /Users/rressler/Courses/DATA-413-613/lectures_book/.venv/lib/python3.14/site-packages/numpy
numpy_version:  2.3.5

NOTE: Python version was forced by VIRTUAL_ENV